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Finding structure in iris with sigPCA3 months ago
Overview | Prepare the measurements | Test the eigenvalue spectrum | Interpret the retained component | What about eigenvalues below the lower bound? | Practical considerations | References
Finding structure in Palmer penguins with sigPCA3 months ago
Overview | Start from the morphological measurements | Fit the conventional PCA | Test the eigenvalue spectrum | Interpret the retained structure | What about eigenvalues below the lower bound? | Practical considerations | References
punKEGGer: parsing and visualization of KEGG pathways for network science3 months ago
Introduction | Example 1: Parse a single KEGG pathway | Example 2: Add gene annotations | Example 3: Visualize your pathway | Alternative layout using ggraph: | Example 4: Combine pathways and connect to your network science pipeline
sigPCA: Statistical Significance Testing for Principal Components1 years ago
Introduction | Basic Example: White Noise | Example: Latent Signal | Optional: Permutation-Based p-values | Interpretation | References